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Anant, Aashish Kumar
- Molecular diversity of Nilaparvata lugens (Stål.) (Hemiptera: Delphacidae) from India based on internal transcribed spacer 1 gene
Abstract Views :93 |
PDF Views:35
Authors
Govindharaj Guru-Pirasanna-Pandi
1,
Aashish Kumar Anant
1,
Jaipal Singh Choudhary
2,
Soumya Bharati Babu
1,
G. Basana-Gowda
1,
M. Annamalai
1,
Naveenkumar Patil
1,
Totan Adak
1,
P. Panneerselvam
1,
Prakash Chandra Rath
1
Affiliations
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 ICAR-RCER Farming System Research Centre for Hill and Plateau Region, Ranchi 834 010, IN
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, IN
2 ICAR-RCER Farming System Research Centre for Hill and Plateau Region, Ranchi 834 010, IN
Source
Current Science, Vol 122, No 12 (2022), Pagination: 1392-1400Abstract
Brown planthopper, Nilaparvata lugens, is the major pest of rice in India and causes significant yield loss. It causes damage by sucking the plant sap leading to a characteristic symptom called ‘hopper burn’. The present study was undertaken to assess the genetic variability of N. lugens populations from different rice ecologies in India, to comprehend and assist in planning proper management strategies. We evaluated the molecular diversity in 17 N. lugens populations based on internal transcribed spacer 1 (ITSI) gene sequences. In all, 53 unique haplotypes were identified and their numbers varied from 1 to 10 in the sampled populations. Genetic diversity indices like nucleotide diversity, haplotype number, haplotype diversity and average number of nucleotide differences revealed low to high levels of genetic diversity among the populations. A highly significant negative relation of Fu’s F and Tajima’s D tests with insignificant sum of square deviation (SSD) values indicated possible recent expansion of N. lugens in different Indian regions with a population expansion time of 3.9 million years. A non-significant correlation in isolation pattern by distance indicated that geographic barriers present in India are inadequate to bring genetic differentiation among N. lugens from different migratory populations. In the present study, the ITSI gene sequence was used to analyse genetic structure among N. lugens in India.Keywords
Genetic Structure, Haplotypes, Molecular Diversity, Nilaparvata Lugens, RiceFull Text
References
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- Population genetic structure and migration pattern of Nilaparvata lugens (Stål.) (Hemiptera: Delphacidae) populations in India based on mitochondrial COI gene sequences
Abstract Views :77 |
PDF Views:30
Authors
Guru-Pirasanna-Pandi Govindharaj
1,
Jaipal Singh Choudhary
2,
Aashish Kumar Anant
3,
C. Parameswaran
3,
G. Basana-Gowda
3,
Totan Adak
3,
P. Paneerselvam
3,
M. Annamalai
3,
Naveenkumar Patil
3,
Prakash Chandra Rath
3
Affiliations
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, India
2 ICAR-Reseach Complex for Eastern Region, Farming Systems Research Centre for Hill and Plateau Region, Ranchi 834 010, India
3 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, India
1 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, India
2 ICAR-Reseach Complex for Eastern Region, Farming Systems Research Centre for Hill and Plateau Region, Ranchi 834 010, India
3 Division of Crop Protection, ICAR-National Rice Research Institute, Cuttack 753 006, India
Source
Current Science, Vol 123, No 3 (2022), Pagination: 461-470Abstract
Despite the economic and ecological impact of the brown planthopper, Nilaparvata lugens infestation associated with rice cultivation in India, studies on its genetic structure are lacking. Hence, the present study was conducted to assess the genetic variability of N. lugens in India. The study evaluated the diversity in N. lugens populations using mitochondrial cytochrome oxidase subunit I gene sequences from India, and compared them with the Bangladesh, China and Japan populations. In all, 47 unique haplotypes were identified and the haplotype number varied from 6 to 18 in the sampled populations. Genetic diversity indices like nucleotide diversity (0.004), average number of nucleotide differences (1.98), haplotype diversity (0.667) and haplotype number (47) of N. lugens populations from India revealed a low level of genetic diversity. A highly significant negative correlation of the demographic history of N. lugens populations along with no significant sum of square deviations indicated possible recent expansion of the brown planthopper in India. A non-significant correlation in isolation pattern by distance results indicated that geographic barriers present in the country are not sufficient for genetic differentiation among N. lugens from different migratory populations. In this study, the genetic diversity of N. lugens populations from India is compared with other Asian populationsFull Text
References
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