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Mallick, Bidisha
- Insights into Rhizospheric Bacterial Abundance of Bruguiera gymnorhiza (l.) LAM. from the Indian Sunderbans
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PDF Views:2
Authors
Rajdeep Das
1,
Bidisha Mallick
1,
Debleena Roy
1,
Suchita Sinha
1,
Rajat Banerjee
2,
Sayak Ganguli
3
Affiliations
1 Department of Botany, Lady Brabourne College, Kolkata-700017, West Bengal, IN
2 Department of Biotechnology, University of Calcutta, Kolkata-700019, West Bengal, IN
3 Department of Biotechnology, St. Xavier’s College, Kolkata-700016, West Bengal, IN
1 Department of Botany, Lady Brabourne College, Kolkata-700017, West Bengal, IN
2 Department of Biotechnology, University of Calcutta, Kolkata-700019, West Bengal, IN
3 Department of Biotechnology, St. Xavier’s College, Kolkata-700016, West Bengal, IN
Source
Journal of Environment and Sociobiology, Vol 17, No 1 (2020), Pagination: 43-47Abstract
The sturdiness of mangrove plants, such as Bruguiera gymnorhiza (L.) Lam, has been related to their inherent physiological resistance and beneficial interactions with associated and specific microbial communities. Development in metagenomics provides a more complete picture of rhizosphere microbiome. In this work we analysed bacterial community of ischolar_main rhizosphere of B. gymnorhiza using 16s rRNA metagenome next generation sequencing (Oxford Nanopore minion platfrom) and found Candidatus, Ectothiorhodospira, Holophaga, Nitrospira, Pelagibius, Sulfitobacter, Thioalkalivibrio, Vicinamibacter, Woeseia to be most abundant genera, which provides a new insight into the functional and microbial diversity of the rhizospheric assemblage of the plant under study.
Keywords
Bruguiera gymnorhiza, Metagenomics, Microbiome, Oxford Nanopore, 16s rRNA
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