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Piperpep - A Database of Experimentally Generated Peptides from Black Pepper (Piper nigrum L.)


Affiliations
1 Division of Crop Improvement, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
2 Division of Crop Protection, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
 

The Piperpep database is a compilation of peptide data from mass spectrometry analysis of a medicinally important export oriented crop - black pepper, developed by the fact that any mass spectrometry derived data would be an excellent source for genome annotation in future. This database has 1001 peptides, including 36 antimicrobial peptides annotated from the leaf of black pepper. The user friendly browsing and search tools would help the researcher with crop improvement in black pepper and also in other crops via peptide or protein data. The information on antimicrobial peptides in this database is expected to cater towards development of new drugs for agricultural and medicinal uses.
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Abstract Views: 279

PDF Views: 84




  • Piperpep - A Database of Experimentally Generated Peptides from Black Pepper (Piper nigrum L.)

Abstract Views: 279  |  PDF Views: 84

Authors

P. Umadevi
Division of Crop Improvement, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
Vivek Srivastav
Division of Crop Protection, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
M. Anandaraj
Division of Crop Protection, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
Johnson K. George
Division of Crop Improvement, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India
Santhosh J. Eapen
Division of Crop Protection, ICAR-Indian Institute of Spices Research, Kozhikode 673 012, India

Abstract


The Piperpep database is a compilation of peptide data from mass spectrometry analysis of a medicinally important export oriented crop - black pepper, developed by the fact that any mass spectrometry derived data would be an excellent source for genome annotation in future. This database has 1001 peptides, including 36 antimicrobial peptides annotated from the leaf of black pepper. The user friendly browsing and search tools would help the researcher with crop improvement in black pepper and also in other crops via peptide or protein data. The information on antimicrobial peptides in this database is expected to cater towards development of new drugs for agricultural and medicinal uses.

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DOI: https://doi.org/10.18520/cs%2Fv111%2Fi9%2F1453-1455